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The primer for in vivo DNA replication is:


A) The 3' hydroxyl of the preceding Okazaki fragment.
B) A short piece of RNA.
C) A nick made in the DNA template.
D) A primer is not always required for DNA replication.
E) All of these are true.

F) B) and C)
G) D) and E)

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In Escherichia coli , the enzyme principally responsible for the synthesis of new DNA strands is


A) DNA polymerase I
B) DNA polymerase III
C) DNA ligase
D) primase

E) B) and C)
F) C) and D)

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Semiconservative replication implies that


A) each of the new double stranded DNA molecules contains one of the original intact strands and one completely new strand.
B) one of the new double stranded DNA molecules contains both of the original strands, while the other contains two new strands.
C) each of the new double stranded DNA molecules contains strands that are composed of segments of original and newly synthesized material.
D) None of these.

E) None of the above
F) A) and B)

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A prokaryotic replisome typically contains three molecules of DNA pol III, but only one molecule of DNA pol I. Why?


A) The DNA pol I works on the leading strand, while DNA pol IIIs work on the Okazaki fragments. since there are several of those, it takes more proteins to keep up.
B) DNA pol I has a built-in proofreading exonuclease; DNA pol III does not. The second DNA pol III is needed to follow the first to accomplish the necessary proofreading.
C) The DNA pol IIIs do most of the work. DNA pol I only has to work on the telomers.
D) DNA pol I replaces the RNA primers with DNA, which really only needs to be done repetitively on one strand, while both strands are worked on by the DNA pol IIIs.

E) None of the above
F) A) and B)

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All the following describe the general mechanism of DNA synthesis, except :


A) From the perspective of the DNA template strands, one strand is made 5' → 3' while the other strand is made 3' → 5'.
B) The strands become separated during synthesis.
C) Synthesis occurs in both directions from the starting site of synthesis.
D) Synthesis of DNA is a very accurate process.
E) All of these are correct.

F) A) and D)
G) A) and C)

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When the synthesis of new DNA is directed by an original template DNA molecule


A) the DNA produced has two newly formed strands (no change in the original DNA)
B) two DNA molecules are formed, each with one new strand and one strand from the original DNA
C) there is random arrangement of newly formed and original DNA on the two strands of the DNA produced
D) no information is available on this subject

E) B) and D)
F) A) and D)

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Which of the following is not a function of DNA Polymerase III?


A) Polymerization.
B) Ligating the final products.
C) Proofreading.
D) Clamping on to the template.
E) None of these are functions of DNA Polymerase III

F) A) and B)
G) A) and E)

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The following enzyme is responsible for the bulk of DNA synthesis during replication.


A) DNA Polymerase I
B) DNA Polymerase II
C) DNA Polymerase III
D) DNA Polymerases IV
E) All four can make lots of DNA rapidly.

F) A) and E)
G) A) and D)

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If replication were conservative instead of semi-conservative, the famous Meselson and Stahl experiment would have shown which of the following results after the first round of replication?


A) All of the double helices would have been heavy chains
B) All of the double helices would have been light chains
C) Half of the double helices would have been all heavy chains and the other half would have been all light chains
D) All of the double helices would have been a combination of a heavy strand and a light strand

E) A) and B)
F) C) and D)

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Which of the following is not an activity of DNA Polymerase I?


A) Polymerase activity.
B) Ability to nick intact double stranded DNA.
C) 5' → 3' exonuclease.
D) 3' → 5' exonuclease.
E) All of these are present in DNA Pol I.

F) B) and E)
G) A) and D)

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In order to replicate both strands, E. coli


A) displaces one of the strands and folds it back so both strands face in the same direction, so they can be synthesized at once.
B) synthesizes each strand in the opposite direction (one 5' → 3', one 3' → 5') , so they can be synthesized at once.
C) only synthesizes one strand at a time.

D) None of the above
E) All of the above

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Which of the following is NOT an observed event in the flow of genetic information?


A) DNA --> RNA
B) RNA --> DNA
C) RNA --> RNA
D) DNA --> DNA
E) RNA --> Protein
F) Protein --> RNA
G) All of the choices ARE observed

H) A) and F)
I) A) and B)

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Semiconservative replication of DNA was established experimentally by


A) gel electrophoresis.
B) ultraviolet spectroscopy.
C) column chromatography.
D) density-gradient centrifugation.

E) All of the above
F) C) and D)

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Recombination:


A) occurs randomly throughout a chromosome
B) occurs more often in areas called hot spots
C) is a process that only happens under controlled laboratory conditions
D) is a spontaneous process that requires no enzymes

E) None of the above
F) A) and C)

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Which of the activities of DNA Polymerase I is most important in its role of proofreading?


A) Polymerase activity.
B) Ability to nick intact double stranded DNA.
C) 5' → 3' exonuclease.
D) 3' → 5' exonuclease.
E) None of these is used for proofreading.

F) A) and D)
G) C) and E)

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The mechanism of breakage and reunion of DNA strands during recombination was proposed by:


A) Messelson and Stahl
B) Messelson and Weigle
C) Robin Holliday
D) Francis Crick

E) C) and D)
F) B) and C)

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Which of the following activities does E. coli DNA polymerase III lack ?


A) 5' → 3' polymerase
B) 5' → 3' exonuclease
C) 3' → 5' exonuclease
D) E. coli DNA polymerase III has ALL of the above activities.

E) A) and B)
F) A) and C)

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The mechanism for all template-directed synthesis of any type of nucleic acid involves the following:


A) Nucleophilic attack of a 3' hydroxyl toward a nucleoside triphosphate, releasing PPi.
B) Nucleophilic attack of a 5' hydroxyl toward a nucleoside triphosphate, releasing PPi.
C) Nucleophilic attack of a 3' hydroxyl toward a nucleoside triphosphate, releasing Pi.
D) Nucleophilic attack of a 5' hydroxyl toward a nucleoside triphosphate, releasing Pi.
E) More than one of these would work, since the mechanism is not universal.

F) A) and B)
G) C) and D)

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The DNA polymerases in eukaryotes have similar functions to those found in bacteria, but they are not identical.

A) True
B) False

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Which of the following is not required for optimal DNA replication?


A) Primase
B) DNA Polymerase II.
C) Single strand binding proteins.
D) Gyrase
E) All of these are necessary.

F) A) and D)
G) None of the above

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